Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKGKSVKSTKKSVGMPPKTPKTDNNANSHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYESTLQQDLKKILGIEEVIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQTTKDPTHATSYGVFAASLNMELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESLYSRLYMS
3O1Q Chain:A ((24-233))
-----------------------DNNA--HVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYESALQQDLKKILGVEEVIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGEFFNAYAQKTKDPTHATSYGVFAASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCTA---------------------
General information:
TITO was launched using:
RESULT:
Template:
3O1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101852 for 1626 contacts (-62.6/contact) +
2D Compatibility (PS) -22529 + (NN) -10938 + (LL) 2148
1D Compatibility (HY) -30800 + (ID) 10150
Total energy: -174121.0 ( -107.09 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_3O1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1Q-query.scw
PDB file :
Tito_Scwrl_3O1Q.pdb
: