Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3L9Z Chain:A ((1-149))
MIIERLVGNLRDLNPLDFSVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVS---------------------
General information:
TITO was launched using:
RESULT:
Template:
3L9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56104 for 1058 contacts (-53.0/contact) +
2D Compatibility (PS) -15332 + (NN) -2564 + (LL) 1380
1D Compatibility (HY) -21600 + (ID) 7400
Total energy: -101620.0 ( -96.05 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_3L9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L9Z-query.scw
PDB file :
Tito_Scwrl_3L9Z.pdb
: