Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTAKVNDIVRDWVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHPHTAQTSKKDAK
3J3V Chain:J ((4-136))
-TPMANASTIERKWLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVDTGDHVIIINAEKIELTGKKLTDKIYYRHTQHPGGLKSRTALEMRTNYPEKMLELAIKGMLPKGSLGRQMFKKLNVYRGSEHPHEAQKPEVYEL
General information:
TITO was launched using:
RESULT:
Template:
3J3V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48206 for 909 contacts (-53.0/contact) +
2D Compatibility (PS) -14668 + (NN) -7671 + (LL) 208
1D Compatibility (HY) -8400 + (ID) 3450
Total energy: -82187.0 ( -90.41 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3J3V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J3V-query.scw
PDB file :
Tito_Scwrl_3J3V.pdb
: