Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKPKKNTLPCSLSVKMSYFMRLLIKWRTRSLSHKMMTLVQILSILALASKASEDLEEQLKKIKDYIYKTLNAKIASDVYDRVLILVNEYCANEELFDKESVKISDLLIQDIQLYALVDEMLKEDKYQVQHTILKGIIKRKYDEAYSLNSEDRILLEYQERLLEPSYASFSNKKFK
4K1C Chain:A ((51-110))
-------------------FVPLGLIWGHFQLSHTLTFLFNFLAIIPLAAILANATEELADKAGNTIGGLLNATFGNAVELIVSIIALKKGQVRIVQASMLGSLLSNLLLVLGLCFIFGGYNRVQQTFNQTAAQTMSSLLAIACASLLIPAAFRATLPFIDGKILELSRGTSIVIL
General information:
TITO was launched using:
RESULT:
Template:
4K1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27325 for 345 contacts (-79.2/contact) +
2D Compatibility (PS) -6583 + (NN) -4670 + (LL) 832
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -43096.0 ( -124.92 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_4K1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K1C-query.scw
PDB file :
Tito_Scwrl_4K1C.pdb
: