Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKIVLVAIALLISGCASYKITPEHVTSYNNGIQVMTSTQARSKVQLEIAQSKLK------GLNESPLVLYVAAQVLEGKPVVFSRKAISVSINQTN----LPVLSLRQVMKSSFDFEGILQSFNISVPTAPIDNINMITPPMFYYGQGSFLAYNGMMYGGMGMYGPGFGMMMMDDVEEQEVMQESRQALKILAINYLKKNTLNVENKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM |
| 1GN9 Chain:A ((424-539)) | ----------ILTAGCAKYRYNKLNLGDIGGIPRVLDAGQCNDSYSLAVIALKLKEVFGLEDVNDLPIVYNIAW--YEQKAVIVLLALLSLGVKNIHLGPTLPAFLSPNVAKV------LVEQFNIGGITSPQDDLKAFF----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8186 for 608 contacts (-13.5/contact) +
2D Compatibility (PS) -10876 + (NN) -870 + (LL) 9168
1D Compatibility (HY) 4000 + (ID) 200
Total energy: -6964.0 ( -11.45 by residue)
QMean score : -0.017
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