Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKGLSIGNKIILCVALIVIVCVSILGVSLNSRVKEILKESALHSMQDSLHFKVKEVQSVLENTYTSMGIVKEMLPEDTKREIKIQLLKNFILANSHVAGVSMFFKDREDLRLTLLRDNDTIKLMENPSLGSNPLAQKAMKNKEISKSLPYYRKMPNGAEVYGVDILLPLFKENTQEVVGVLMIFFSIDSFSNEITKNRSDLFLIGVKGKVLLSANKSLQDKSITEIYKSVPKATNEVMAILENGSKATLEYLDPFSHKENFLAVETFKMLGKTESKDNLNWMIALIIEKDKVYEQVGSVRFVVVVASAIMVLALIIAITLLMRAIVSNRLEVVSSTLSHFFKLLNNQAHSSDIKLVEARSNDELGRMQTAINKNILQTQKTMQEDRQAVQDTIKVVSDVKAGNFAVRITAEPASPDLKELRDALNGIMDYLQESVGTHMPSI----FKIFESYSG------------LDFRGRIQNASGRVELVTNALGQEIQKMLETSS---NFAKDLANDSANLKECVQNLEKASNSQHKSLMETSKTIENITTSIQGVSSQSEAMIEQGKDIKSIVEIIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRSVTEGNLKIASDSLEISQEIDKVSNDILEDVNKKQF |
| 2CH7 Chain:A ((1-178)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHMKDVQTETFSVAESIEEISKANEEITNQLLGISKEMDNISTRIESISASVQETTAGSEEISSATKNIA-DSAQQAASFADQSTQLAKEAGDALKKVIEVTRMISNSAKDVERVV---ESFQKGAEEITSFVETINAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESQQASENVRRVVNEIRSIAEDAGKVSSEITARVEEGTKLADEADEKLNSIVGAVERINEMLQNIAAAIEEQTAAVDEITT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CH7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15856 for 708 contacts (22.4/contact) +
2D Compatibility (PS) -17137 + (NN) -5696 + (LL) 35636
1D Compatibility (HY) -9200 + (ID) 3400
Total energy: 16059.0 ( 22.68 by residue)
QMean score : 0.328
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