Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKVSVITACFNSEKTIEDTILSVLNQTYKNIEYIIIDGASADSTLEIIQKYKDRIACV--MSEKDEGIYDAMNKGIKRSSGDIIALLNSDDFYKDEFVVEKVVHEFENKNCDSVYGDLGVVKPDCLEKVVRYYESGEFSPKTLLYGVVPAHPTLFVKKAIYERYGLYKTDYKISADFEMIIRLFVVQKISFSYLKEVLVIMRTGGVSASGFKSLLLRNKENLRACQENGIQANVFSMLLKYPRKIMGLFKRESKGSLKRND |
2Z87 Chain:A ((376-478)) | ---VSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPD-AVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56436 for 749 contacts (-75.3/contact) +
2D Compatibility (PS) -11144 + (NN) -7977 + (LL) 580
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -84427.0 ( -112.72 by residue)
QMean score : 0.497
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