Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINTHYTPNFTQLQTLNNINNDATIKDRNQAEQDLQQSSIQDGFSQDNTQNAPDFDRLQALNAINNDGEIKDKSQVEKSLVDGENTPEIYSSLDTYA
2DH4 Chain:A ((212-267))
-------------------------IRDDYLNLKDFQMSS-EKGFAEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQIL
General information:
TITO was launched using:
RESULT:
Template:
2DH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 31585 for 318 contacts (99.3/contact) +
2D Compatibility (PS) -6292 + (NN) -5409 + (LL) 1440
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 17724.0 ( 55.74 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_2DH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DH4-query.scw
PDB file :
Tito_Scwrl_2DH4.pdb
: