Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNTTWSPTSWHSFKIEQHPTYKDEQELERVKKELRSYPPLVFAGEARNLQERLAQVIDNKAFLLQGGDCAESFSQFSANRIRDMFKVMMQMAIVLTFAGSIPIVKVGRIAGQFAKPRSNATEILDDEEVLSYRGDIINGISKKE--REPKPERMLKAYHQSVATLNLIRAFAQGGLADLEQVHRFNLDFVKNNDFGQKYQQIADRITQALGFMRACGVEIERTPILREVEFYTSHEALLLHYEEPLVR---KDSLTNQFYDCSAHMLWIGERTRDPKGAHVEFLRGVCNPIGVKIGPNASVSEVLELCDVLNPHNLKGRLNLIVRMGSKIIKERLPKLLQGVLKEKRHILWSIDPMHGNTVKTNLGVKTRAFDSVLDEVKSFFEIHRAEGSLASGVHLEMTGENVTECIGGSQAITEEGLSCHYYTQCDPRLNATQALELAFLIADMLKKQRT |
2W19 Chain:A ((46-471)) | -----------------QQPTWPADQALA-MRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADIDALG---LRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACGVA-DRN--LQTAEIYASHEALVLDYERAMLRLSDG---EPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELAVEYVERLDPHNKPGRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPMHGN---------TRHFDRIVDEVQGFFEVHRALGTHPGGIHVEIT-----------------------------RLNTQQSLELAFLVAEMLRD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219456 for 3293 contacts (-66.6/contact) +
2D Compatibility (PS) -41675 + (NN) -26253 + (LL) 3376
1D Compatibility (HY) -36800 + (ID) 9100
Total energy: -329908.0 ( -100.18 by residue)
QMean score : 0.601
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