Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFEGHAEFNMVKDFCSRVY---ELSEFLDKKLQVKYEDKGEPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFLASRLGL |
| 1VKN Chain:A ((8-94)) | ------------------------------------------------------------------------------GATGYTGLELVRLLKNHPEAKITY-LSSRTYAGKKLEEIFPSTLENSILSEFDPEKVS--KNCDVLFTALPAGASYDLVRELKGVKIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHREEIKNAQVVGNPGCYPTSVILALAPALKHNLVDPETILVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17554 for 551 contacts (-31.9/contact) +
2D Compatibility (PS) -8651 + (NN) 2179 + (LL) 5004
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -25022.0 ( -45.41 by residue)
QMean score : 0.246
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