Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSFLEKNPFFFTLAFIFVFSIAGLVEILPNFFKSA--RPIEGLRPYTVLETAGRQIYIQEGCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPFLWGSKRIGPDLHRVGDYRTTDWHEKHMLDPKSVVPHSIMPAYKHLFIKKSDF-DTAYAEALTQKKVFGVPYDTENGVKLGNVEEAKKAYLEEAKKITADMKDKRVLEAIERGEVLEIVALIAYLNSLGNSRINANQNAK |
3MK7 Chain:B ((7-171)) | ----LEKNVGLLTLFMILAVSIGGLTQIVPLFFQDSVNEPVEGMKPYTALQLEGRDLYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPSYPWLVENTLDGKDT--AKKMSALRMLGVPYTEEDIAGARDSVNGKTEMDAMVAYLQVLGTALTNK--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20385 for 937 contacts (-21.8/contact) +
2D Compatibility (PS) -16991 + (NN) -7730 + (LL) 3552
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -61404.0 ( -65.53 by residue)
QMean score : 0.299
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