Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKEKNFWPLGIMSVLIFGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAML-KTYENFKSNYRFSVGLKPLTESPKTPILPYFSKGTHGDKKIQENLLNNALILEKSNTLYAQLQPLKPALDSPNIQVYLAFYPSQSQPRLLGTLDCKNACEPLKFDLLEGDKVGRYKILFKFVFKNKEELILEQLAFFK
2X40 Chain:A ((375-440))---------------------------------PRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPR-------IKPKLPENFLSEKEIHKLAKKNDVAVIVISRISGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEVVSWRDLVDGILLVWQAGQETGRIVADVLTG


General information:
TITO was launched using:
RESULT:

Template: 2X40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -1942 for 257 contacts (-7.6/contact) +
2D Compatibility (PS) -6009 + (NN) -2469 + (LL) 3084
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -10236.0 ( -39.83 by residue)
QMean score : 0.173

(partial model without unconserved sides chains):
PDB file : Tito_2X40.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2X40-query.scw
PDB file : Tito_Scwrl_2X40.pdb: