Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITIPIVIAFDNHYAIPAGVSLYSMLACAKSENPKSQNPQLQSDNKKLFYKIHCLVDNLSLENQQKLKETLVPFSAFASVDFLDISTPNLYTTSVEPSVIDKIHEAFLQLNIYAKTRFSKMVMCRLFLASLFPQYDKIIMFDADTLFLNDVSESFFIPLDSYYFGAAKDFSSPKSLKHFQTEREREPRQKFSLYEHYLKEKDMQIICENHYNVGFLIVNLKLWRADKLEEHLLNLTHQKGQCVFCPEQDLLT-----LACYQKVLQLPYIYNAHPFMANQKRFIPNQQE------------IIMLHFYFVGKPWILPTALYSKEWHEILLKTPFYAEYSVKFLKQMTECLSLQDKQKTFEFLAPLLNPKTLLEYVFFRLSKIFKRLKERFLNS |
| 1SS9 Chain:A ((1-262)) | ----MDIVFAADDNYA---------AYLCVAAKSVEAAHPDTE-------IRFHVLDAGISEANRAAVAANLR--GGGGNIRFIDVNPEDF---------------AGFPLNI---RHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGACIDLF---------VERQEGYKQKIGMADG-----------EYYFNAGVLLINLKKWRRHDIFKMSCEWVEQYKDVMQYQDEDILNGLFKGGVCYANS-RFNFMPTNYAFMAN----ASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPEEWRGKL------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166232 for 1983 contacts (-83.8/contact) +
2D Compatibility (PS) -24700 + (NN) -1592 + (LL) 9124
1D Compatibility (HY) -15600 + (ID) 2950
Total energy: -201950.0 ( -101.84 by residue)
QMean score : 0.387
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