Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGD-----LANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKE-----------ELSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLID----KIEKMLLIDEDKKSPIHVSSSNYIIEADFELFAIALKNMIDNAIKYSDDK---QVFLDFIGNNLVVSNKSKPL-KEDFEKYLQPYFKS--SNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
| 4BIW Chain:A ((52-270)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEAGPQEFLAAGASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDL-LVMSRNQQKNALVSETIKANQ---LWSEVLDNAAFEAEQM-----GKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -34953 for 1195 contacts (-29.2/contact) +
2D Compatibility (PS) -20245 + (NN) -8092 + (LL) 19696
1D Compatibility (HY) -11600 + (ID) 2450
Total energy: -57644.0 ( -48.24 by residue)
QMean score : 0.330
|
|
|