Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFD-----MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTPEFKAMMEAVKKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK
3RFW Chain:A ((24-270))--------------------------------------------VATVNGKSISDTEVSEFFAPMLRGQ----DFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY---QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKN--QGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK-


General information:
TITO was launched using:
RESULT:

Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28153 for 1481 contacts (-19.0/contact) +
2D Compatibility (PS) -27021 + (NN) -17479 + (LL) 3232
1D Compatibility (HY) -19200 + (ID) 4450
Total energy: -93071.0 ( -62.84 by residue)
QMean score : 0.649

(partial model without unconserved sides chains):
PDB file : Tito_3RFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RFW-query.scw
PDB file : Tito_Scwrl_3RFW.pdb: