Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFD-----MIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTPEFKAMMEAVKKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
3RFW Chain:A ((24-270)) | --------------------------------------------VATVNGKSISDTEVSEFFAPMLRGQ----DFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY---QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKN--QGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28153 for 1481 contacts (-19.0/contact) +
2D Compatibility (PS) -27021 + (NN) -17479 + (LL) 3232
1D Compatibility (HY) -19200 + (ID) 4450
Total energy: -93071.0 ( -62.84 by residue)
QMean score : 0.649
|
|
|