Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLEAHLA
3T9J Chain:A ((21-164))
MKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIAQLGHHPLVTLSEALKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLQAHLA
General information:
TITO was launched using:
RESULT:
Template:
3T9J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42431 for 1054 contacts (-40.3/contact) +
2D Compatibility (PS) -15781 + (NN) -11087 + (LL) 0
1D Compatibility (HY) -19600 + (ID) 7050
Total energy: -95949.0 ( -91.03 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_3T9J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T9J-query.scw
PDB file :
Tito_Scwrl_3T9J.pdb
: