Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFKNPELGGMSLFLQT--QQLKSALRMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA
3G9G Chain:A ((68-131))
------------------------TKILNAQMIESNVLTPQ-EMSAFRFNSLGELRNVWDTVIEELKSDLKSSTEYYNTLDQQVVRELKESVENNTSWRESKDLHSKLSKNAASIEHYSKNNENSSHLEEARRQWDQQSPYLFE
General information:
TITO was launched using:
RESULT:
Template:
3G9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9821 for 274 contacts (35.8/contact) +
2D Compatibility (PS) -6967 + (NN) -4949 + (LL) 3116
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -4479.0 ( -16.35 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3G9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G9G-query.scw
PDB file :
Tito_Scwrl_3G9G.pdb
: