Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIKEKEIELETLKREIAQAEASLEQDFIKHMVDKTNEKVEDLFFSNKPEFYRFVFTEQNNYLREKLTDKVGRAMDLIDEIQRDKTENESLENGAKFKKRFVFELQNDLIFLRTKRNTYSAKTEHENFQEKLLAAKDTFRLIKANDFKTKIYPYQIILRLKTKHIIVFKWLKKEIIKRFVKKDLFTETLSIKITDKKGRKYALIANYNHASDIIELMLDDKTYTTTLYYQKPLFDLIKNSNFNLTIKDNTLEINQAKNAYSFKAKNTKTLEY |
| 1VDZ Chain:A ((541-583)) | -GVPLEEIAKLPVREEIGRMKFERDVSKIRSLIDKTNEQFEELF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4335 for 213 contacts (20.4/contact) +
2D Compatibility (PS) -4570 + (NN) -139 + (LL) 18232
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 14358.0 ( 67.41 by residue)
QMean score : 0.650
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