Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKERIVNLETLDFETSQEVSLRPNLWEDFIGQEKIKSNLQISICAAKKRQESLDHMLFFGPPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQFYSPSELSLIIKKAAAKLNQDIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLMDLSITLHALNELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEPFLLANGYLERTAKGRIATPKTHALLKIPTLNPQTLF |
| 3PFI Chain:A ((23-332)) | --------------------LRPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEMSANIKTTAAPMIEKSGDLAAILTNLSEGDILFIDEIHRLSPAIEEVLYPAMEDYRL---------AQTIKIDLPKFTLIGATTRAGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKPIGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSALKLNY--E---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161444 for 2374 contacts (-68.0/contact) +
2D Compatibility (PS) -32187 + (NN) -7762 + (LL) 2616
1D Compatibility (HY) -33600 + (ID) 10500
Total energy: -242877.0 ( -102.31 by residue)
QMean score : 0.580
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