Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCHNLPRVPIDILLGGPPCQSYSTLGK-RKMDE-KANLFKEYLRILDLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFYFPKPIKTHFSLKDALGDLPPIQSGENGDALGYLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYINTYAKMWWEKPAPTITRNFSTPSSSRC-IHPRDS--------------------RALSIREGARLQSFPDNYKF-YGSANAKRLQIGNAVPPLLSAALAHAV---FDFLRGKNV |
| 3UBT Chain:Y ((6-328)) | ------LFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNH-SAKLIKGDISKISSDEFPKC--DGIIGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIGFRKELNINYLPPIPHLIKPTFKDVIWDL-----------------KDNPIPALDKNKTNGNKCIYP-NHEYFIGSYSTI------------------FMSRNRVRQWNEPAFTV-----QASGRQCQLHPQAPVMLKVSKNLNKFVEGKEHLYRRLTVRECARVQGFPDDFIFHYESLNDGYKMIGNAVPVNLAYEIAKTIKSALEICK---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -114341 for 2409 contacts (-47.5/contact) +
2D Compatibility (PS) -31362 + (NN) -10420 + (LL) 1040
1D Compatibility (HY) -19600 + (ID) 5400
Total energy: -180083.0 ( -74.75 by residue)
QMean score : 0.386
|
|
|