Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVGVYGASGRIGKLLLEELK--GGYKGLEL------SSVFVRQKCETDFSSFSHAPLVTNDLKAFVKACECVVDFSLPKGVDHLLDVLLECPKILVSGTTGLEKETLEKMQKLALKAPLLHAHNMSIGIMMLNQLAFLTSLKLKD-ADIEIVETHHNLKKDAPSGTALSLYETCTKARGYDEKNALITHREG---LRSKESIGIATLRGGDVAGKHTIGFYLEGEYIELSHTATNRSIFAKGALEVALWLKDKAAKKYEISEMFG |
| 4YWJ Chain:A ((11-274)) | -RIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGADAGELAGLGRIGVPL-SGDLGKVCEEFDVLIDFTHPSVTLKNIEQCRKARRAMVIGTTGFSADEKLLLAEAAKDIPIVFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHKVDAPSGTALRMGEVVAQALGRDLQEVAVYGREGQTGARARETIGFATVRAGDVVGDHTVLFAAEGERVEITHKASSRMTFARGAVRAALWLEGKENGLYDMQDVLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137918 for 1991 contacts (-69.3/contact) +
2D Compatibility (PS) -27106 + (NN) -11677 + (LL) 400
1D Compatibility (HY) -10800 + (ID) 4550
Total energy: -191651.0 ( -96.26 by residue)
QMean score : 0.520
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