Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPGLHHQEK-LLNQCMLSQALKAMGDAELRVFLASVHDDLKGYEEFLSLCQK---PHILALSKIDTATHKQVLQKLQEYQKYSSQFLALVPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIEEERID-KVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKEEKSLQKLGYIYQRNRD |
| 1EGA Chain:A ((5-295)) | -KSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRH---RIVGIHTEGAY--QAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157588 for 2168 contacts (-72.7/contact) +
2D Compatibility (PS) -30281 + (NN) -4696 + (LL) 1112
1D Compatibility (HY) -21600 + (ID) 5550
Total energy: -218603.0 ( -100.83 by residue)
QMean score : 0.322
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