Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELGFNEAERQKILDSNSSLIRNANEVRDKFIQNYAISLKDSNDPQDFLRRVQELRINMQKNFISFDTYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGRKLNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNLE
1S2X Chain:A ((9-186))
-ELGFNEAERQKILDSNSSLMRNANEVRDKFIQNYATSLKDSNDPQDFLRRVQELRINMQKNFISFDAYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFTCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGKKLNEIVQDIGTKYIILSKNK--------------------
General information:
TITO was launched using:
RESULT:
Template:
1S2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100671 for 1262 contacts (-79.8/contact) +
2D Compatibility (PS) -18937 + (NN) -5611 + (LL) 2308
1D Compatibility (HY) -25200 + (ID) 8650
Total energy: -156761.0 ( -124.22 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_1S2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S2X-query.scw
PDB file :
Tito_Scwrl_1S2X.pdb
: