Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETPKVLLKNLQDCKIHFIGIGGIGISGLAKYLKAQGAKISGSDIAISPSVKYLKALGVEINIPHDPKAINHQDVIIHSAIIKEDNTEIQRAKELEIPILSRKDALYSILKDKRVFSVCGAHGKSSITAMLSAIC------PAFGAIIGAHSKEFDSNVRESADMSLVFEADESDSSFLFSNPFCAIVPNTEPEHLEHYDHDLERFFFAYKYFLDHAQ---KRVIYKEDPFL----KNYSKDAIVL---EKKDIYNIQYILKDG--EPYTSFELKNLGAFLVWGL-GEHNATNASLAILSALDE-LNLEEIRNNLLNFKGIKKRFD-----ILQKNNLILIDDYAHHPTEIGATLKSARIYANLLNTQEKIIVIWQAHKYSRLMDNLEEFKKCFLEHCDRLIILPVYSASEVK-RDIDLKA------HFKHYNPTFIDRVRKKGDFLELLVNDNVVETIEKGFVIGFGAGDITYQLRGEM |
| 1GQY Chain:A ((7-468)) | --EIRKIIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTF--VNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQPMVSVVTNMEPD-------DFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQAD-YRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWG----DKRIVMIFQPHRYSRTRDLFDDFVQV-LSQVDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDG-------DLILAQGAGSVSKISRGLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207504 for 3548 contacts (-58.5/contact) +
2D Compatibility (PS) -45496 + (NN) -7257 + (LL) 2356
1D Compatibility (HY) -22800 + (ID) 7650
Total energy: -288351.0 ( -81.27 by residue)
QMean score : 0.468
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