Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKMNKVVLHKEYSGFVRFFHWVRALSIFTLIATGFYIAYPFLQPNSSFYKGVYLLQAYVRSFHVMFGFLLISALIFRTYLFFTKESLMERRSFSQLLSPKAWIDQMKAYFLISDKPHTKGLYNPIQLVAYFTLVVLIVLMSLSGIVLYYNVYHEGLGAFLANAFKWFEALCGGLANVRFIHHLATWGFILFVPVHVYMVFFHSIRYDSSGADSMINGYGYTKE
1KQF Chain:C ((15-135))
-----------------RACHWTVVICFFLVALSGISFFFPTLQ----WLTQTFGTPQMGRILHPFFGIAIFVALMF-MFVRFVHHNIPDKKDIPWLLNI---VEVLKGN---EHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAK
General information:
TITO was launched using:
RESULT:
Template:
1KQF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72189 for 785 contacts (-92.0/contact) +
2D Compatibility (PS) -12280 + (NN) -2839 + (LL) 2076
1D Compatibility (HY) -12000 + (ID) 1300
Total energy: -98532.0 ( -125.52 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_1KQF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KQF-query.scw
PDB file :
Tito_Scwrl_1KQF.pdb
: