Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFFILFFMGMLGVGFSQTELDLKDLEKKPAGIVRDYYLWRYISDKKTSLENAKKAYELTQNKNSALQKAMQEKGVENSDKSPDAKMPEDIYCKQITLESMLETTDAFQASCIAIALKSKIRDFDKIPIQTFKPLQEKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALAKSNATQSNAQTFFILGINEILHKKTSKALKYFERSEAVVKDDDFSKDRAIFWQYLASKKKKTLEHLSQSPALNLYSLYASRKLKTTPSYRIISHIQNLSQENPPFNTYDPFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNTDERAMAYAIARQESFLLPALISRSFALGLMQIMPFNVGPFAKSLGMDNVDL-NDMFNPNIALKFGNYYLNHLKKEF-NHPLFVAYAYNAGPGFLRRWLESSKRFKGKNHFEPWLSMELMPYSETRMYGFRVMLNYLIYQEIFGNFIPIDAFLEQTLNSKDKP |
| 1QSA Chain:A ((471-604)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAF-----VESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98779 for 963 contacts (-102.6/contact) +
2D Compatibility (PS) -13481 + (NN) 77 + (LL) 31276
1D Compatibility (HY) -6000 + (ID) 2400
Total energy: -89307.0 ( -92.74 by residue)
QMean score : 0.364
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