Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHNGHDKLNGVLRGFLGDSFTLDGKEGGLNMSKMLEFIKKEKPK----MNVLLMGATGVGKSSLINALFGKEITKTGVGKPITQHLEKYIDEEKGL-----ILWDTKGIEDKDY--HDTMQSIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRVQERERELL-----SFAKHWNIPTIVVFTHTQAEAGDAFVQETKGIIDEEWGFKGFVRAYVRVNSVAFSFRGLKVPVEGLEELVDETKKCLSDAEKNKKRHFLSIQRVKIQERKQAMIEECKTIIHVASGAAGVAGLIPIPFSDALAIAPIQAGMIYKMNDAFGMDLDKSVGASLVAGLLGVTAVAQVGRTLVNGFLKFIPVVGSVAGGATAAVITEGIGFAYLKVLEKCFNDETGEVNLPGEVGMITSLFKENYLNLDTIKKLKP |
| 3BB3 Chain:A ((21-173)) | ---------------------------------KLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVS---PF---GLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVN--------RTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAGSKMRKQEFEDSAIAVVYAENSGRCSKNDKDEKALPNGEAWIPNLVKAITDVATNQRKAIHVD------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39224 for 795 contacts (-49.3/contact) +
2D Compatibility (PS) -14155 + (NN) -790 + (LL) 12832
1D Compatibility (HY) -13600 + (ID) 2150
Total energy: -57087.0 ( -71.81 by residue)
QMean score : 0.493
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