Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKAEFIDLVKKAGKYNSKREAEEAINAFTLAVETALSKGESVELVGFGKFETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
1HUE Chain:A ((1-89))
MNKTELINAVAETSGL-SKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK---
General information:
TITO was launched using:
RESULT:
Template:
1HUE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8725 for 492 contacts (17.7/contact) +
2D Compatibility (PS) -9770 + (NN) -4492 + (LL) -44
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -13331.0 ( -27.10 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_1HUE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HUE-query.scw
PDB file :
Tito_Scwrl_1HUE.pdb
: