Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDANCLKLMFVAGSQDFYHIKGDRTNALLDTLELALQSKITAFQFRQKGDLALQDPVEIKRLALECQKLCKKYGTPFIINDEVRLALELKADGVHVGQEDMAIEEVVTLCQKRLFIGLSVNTLEQALKARHLDHIAYLGVGPIFPTPSKKDAKEVVGVNLLKKIHDSGVEKPLIAIGGITTDNASKLQKFS--GIAVISAITQAKDKALAVEKLLKNA
3O15 Chain:A ((26-224))
------LSVYFIMGSN---NTKAD----PVTVVQKALKGGATLYQFREKGGDALTGEARIK-FAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAIGD-MILGVSAHTMSEVKQAEE-DGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEI
General information:
TITO was launched using:
RESULT:
Template:
3O15.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157352 for 1644 contacts (-95.7/contact) +
2D Compatibility (PS) -21584 + (NN) -15800 + (LL) 1124
1D Compatibility (HY) -12000 + (ID) 4100
Total energy: -209712.0 ( -127.56 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3O15.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O15-query.scw
PDB file :
Tito_Scwrl_3O15.pdb
: