Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRASFVEVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDEALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHLKIDTGMHRLGLEPTFKSIETIKKIRALKGLEVEGIFTHLSNADSNIKTHAKNQMKVFNAFLEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTILKNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRIQVAINNQLAPLIGKVCMDQCFVKLN-DIEAKEGDEVILFGDKSTKANDASEIATLLNTIPYETISTLSKRLERVYV |
| 4LUT Chain:A ((8-371)) | -----TWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVARTAEGIELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKACVHVKID-------FQPNEESVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNYKFMSDKLDEAGVKIAIKHVSNSAAIMD-C---PDLRLNMVRAGIILYGHYPSDDVFKDRLE-LRPAMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIGYADGFTRIQKNP-KVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGEVT---AERIAKDLGTINYEVLCMISRRVDRVYM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240135 for 2998 contacts (-80.1/contact) +
2D Compatibility (PS) -38097 + (NN) -4910 + (LL) 1168
1D Compatibility (HY) -29200 + (ID) 6400
Total energy: -317574.0 ( -105.93 by residue)
QMean score : 0.546
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