Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDALVEIEAIAIK
2DYY Chain:A ((1-125))
MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKD-NDFAKMNEVYAEYFGESKPARVAVEVSRLPKDVLIEIEAIAYK
General information:
TITO was launched using:
RESULT:
Template:
2DYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45007 for 935 contacts (-48.1/contact) +
2D Compatibility (PS) -13075 + (NN) -2551 + (LL) 176
1D Compatibility (HY) -14000 + (ID) 3350
Total energy: -77807.0 ( -83.22 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2DYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DYY-query.scw
PDB file :
Tito_Scwrl_2DYY.pdb
: