Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEVLKKEMLELEKLALELENLVENEVKNIKETQQIIFKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYAEVLTSGDMITCPYCGRILYAESTHESNAQPPKESQPKESQEESQEESQEESQESV
3NA7 Chain:A ((4-237))
-NTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGA--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19347 for 1494 contacts (-12.9/contact) +
2D Compatibility (PS) -26285 + (NN) -20529 + (LL) 1780
1D Compatibility (HY) -28400 + (ID) 11350
Total energy: -104131.0 ( -69.70 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_3NA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NA7-query.scw
PDB file :
Tito_Scwrl_3NA7.pdb
: