Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSVTIKSIKA----KLGKNHYHKVSGSHQVGGAHKVISSFNTKNPFFIRQHLKSH
2ARY Chain:A ((232-289))
-ALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSVTGAKQVNYRGQVVSLIRMRNPWGEVEWTGAW
General information:
TITO was launched using:
RESULT:
Template:
2ARY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7743 for 250 contacts (31.0/contact) +
2D Compatibility (PS) -5614 + (NN) 454 + (LL) 208
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -2109.0 ( -8.44 by residue)
QMean score : 0.086
(partial model without unconserved sides chains):
PDB file :
Tito_2ARY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ARY-query.scw
PDB file :
Tito_Scwrl_2ARY.pdb
: