Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFELTKKTKFDGEMIGYTEELLTFLVRDFFNGIFKSKVIP-KMPIFCGDVKCEDFNALRSLVYLSVLELEETINPNKIPF
1NO5 Chain:A ((53-105))
------------------SEEPLDFLARDRLKEAFSESDLPWRVDLLDWATTSEDFREIIRKVYVVIQEKE----------
General information:
TITO was launched using:
RESULT:
Template:
1NO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9494 for 208 contacts (-45.6/contact) +
2D Compatibility (PS) -5325 + (NN) -214 + (LL) 1764
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -15669.0 ( -75.33 by residue)
QMean score : -0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1NO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NO5-query.scw
PDB file :
Tito_Scwrl_1NO5.pdb
: