Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSVIIIESPNKVAKIREITG--AKVFATIGHFMQLK----SYDENNGFKPTFDYDQEKKKHIFEMIEACKNKKVYIATDPDREGYAIGYMFYQKIKNVASSIYRAEFFEITPSGINKGLQNALLFENTNRQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREIEKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKACLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFEA--------GLITYIRTDAESLSVEFLDETESFYAPIYKDLYL-KREYKAGKQSQAEAHEAIRITHPHTTEDLESIVYNANITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKGLKSAGFLAMFSKKELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLSTIKRNAPSAYKEADFVKLLENKGIGRPSTYASYLPTLVKREYISISQDKKHIITPTHKGKRVVEVFENAYQFIIDLTYTKQMEEVLDEIVENKSSYVDFISNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNLSEEFKNYKEDNRVAKAFLDRYIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEILAKKHNVKLPKGFKYSMKVCGDFINEYHKK |
| 2GAI Chain:A ((9-527)) | -----IVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHI-ARVTNTLGRKNRIVFSEITPRVIREAVKNP---REIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKS--NLSAGRVQSATLKLVCDREREILRF--VP---KKYHRITVNF-DGLTAEIDVK-------EKKFFD-AETLKEIQSIDE---LVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEVFGEEYVG-------------AHEAIRPTNVFMTPE-EAGKY----LNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYR----------FKGTVLKKIFDGYE----KVWKTERNTGEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYI---KKIRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRNDRIVVDFPTNQKCSCGKEMRLSFGKYGFYLKCECGKTRSVKNDEIAVIDDGKIFL----------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148199 for 3944 contacts (-37.6/contact) +
2D Compatibility (PS) -50971 + (NN) 2435 + (LL) 6444
1D Compatibility (HY) -30800 + (ID) 8450
Total energy: -229541.0 ( -58.20 by residue)
QMean score : 0.377
|
|
|