Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSKKPHYRVSLSEQALNHEKLMRAIVKNLADTPMVLKGETALYLGYGLNRFSEDLDFDCHKKINLLGRVKSAIPNGIILNDIHIKKDTDSVGRYMVRYATKDNKEEQTLKLEISYRDAPKESEVNVIEGMRIAKIERIIDNKLCACFDGEHTRTKARDLFDLHFLAKHYEEHFNLDLASRLKDFSKDPDKLVSDYLVDVKLDALLNQIMDLEETALELGVMAQLIHKKLEKQSHSLNALQEQQGYSNNDNSLDNSNENTYTPKRRR
4OK0 Chain:A ((32-255))
-----------LSEQALNHEKLMRAIVKNLADTPMVLKGETALYLGYGLNRFSEDLDFDCHKKINLLGRVKSAIPNGIILNDIHIKKDTDSVGRYMVRYATKDNKEEQTLKLEISYRDAPKESEVNVIEGMRIAKIERIIDNKLCACFDGEHTRTKARDLFDLHFLAKHYEEHFNLDLASRLKDFSKDPDKLVSDYLVDVKLDALLNQIMDLEETALELGVMAQLIHKKLEKLEHH-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4OK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101892 for 1720 contacts (-59.2/contact) +
2D Compatibility (PS) -24358 + (NN) -16111 + (LL) 1148
1D Compatibility (HY) -32000 + (ID) 11100
Total energy: -184313.0 ( -107.16 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_4OK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OK0-query.scw
PDB file :
Tito_Scwrl_4OK0.pdb
: