Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPKATALSDELKEALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHVNWHFVSQCYEWAKKEGLGSVDYYINELVHKKA
3CEI Chain:A ((1-212))
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPKATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHINWHFVSQCYEWAKKEGLGSVDYYINELVHKKL
General information:
TITO was launched using:
RESULT:
Template:
3CEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127312 for 1728 contacts (-73.7/contact) +
2D Compatibility (PS) -21512 + (NN) -3187 + (LL) 0
1D Compatibility (HY) -30800 + (ID) 10500
Total energy: -193311.0 ( -111.87 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_3CEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CEI-query.scw
PDB file :
Tito_Scwrl_3CEI.pdb
: