Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHILVSGATSGFGLEIAKAFLQKNHVVFGTGRRQENLQKLQLAYPKRFIPLCFDLQNKPETKRAIETIFSMTDRIDALINNAGLALGLNKAYECELDDWEVMIDTNIKGLLHLTRLILPSMIEHDQGTIINLGSIAGTYAYPGGNVYGASKAFVKQFSLNLRADLAGTNIRVSNVEPGLCGETEFSMVRFKGDKIKAQSVYENTLYLKPQDIANIVLWIYEQPSHVNINRIEIMPTSQTFAPLPTHKNP
3ASU Chain:A ((3-240))
---VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG----------------------VALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSY---------
General information:
TITO was launched using:
RESULT:
Template:
3ASU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115937 for 1790 contacts (-64.8/contact) +
2D Compatibility (PS) -22898 + (NN) -4802 + (LL) 2012
1D Compatibility (HY) -20000 + (ID) 5300
Total energy: -166925.0 ( -93.25 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3ASU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASU-query.scw
PDB file :
Tito_Scwrl_3ASU.pdb
: