Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDKIIEILQISPIVPVVVVENIKDAVPLAQSLIEGGIPIIEVTLRSNCALEAIELIAKNVPKMRVGAGTILNLTQLEQAQNRGAEFLISPGLTIKLLEHAKKKDMPLIPGVSSSSEVMQALELGYNALKFFPAEYCGGVKLLNAFNGPFKGVKFCPTGGISADNMRSYLALENVVCVGGSWLTPKDLIQNKEWDKITEICKRALALR
1FQ0 Chain:A ((26-208))
----------------------LEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGA
General information:
TITO was launched using:
RESULT:
Template:
1FQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129802 for 1445 contacts (-89.8/contact) +
2D Compatibility (PS) -20445 + (NN) -15344 + (LL) 2412
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -187529.0 ( -129.78 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_1FQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FQ0-query.scw
PDB file :
Tito_Scwrl_1FQ0.pdb
: