Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGILTFMDFCSGIGGGRLGLERCHLKCVGHAEINHEAIRTYELFFKDTHNFGDLMRINPNDLPNFDVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIRILKVKQPKCFLLENVKGLIHHKQQETFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLK-RPFNFPLGLANDYCFKDFLDADNECYLDVSNATFQRYLRNPYNHNRVFLEDILTLENAVLDTRQSDLRLYFN--VFPTLRTSRHGLF-----YTQKGKIKRLNAVESLLLQGFPRDLIAKIKNNPNFKESHLLSQAGNAMSVNVIAAIAKQMLKAFNNE |
2UYH Chain:A ((12-323)) | ---LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNEKTIPDHDILCAGFPCQAFSIQGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSE----VEHLVIDRKDLVMTNQ-EIEQTTPKTVRLGIVGKGGSGERIYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSY----KVHPSTSQAY--KQFGNSVVINVLQYIAYNIGSSLNFK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2UYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160420 for 2552 contacts (-62.9/contact) +
2D Compatibility (PS) -32350 + (NN) -11826 + (LL) 1508
1D Compatibility (HY) -22000 + (ID) 5250
Total energy: -230338.0 ( -90.26 by residue)
QMean score : 0.421
|
|
|