Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGELFKITTTSNTTYHAKFVVVAIGKMG-QPNRPTTYKIPVALSKQVVFSINDCKE--NEKTLVIGGGNSAVEYAIALCKTT-PTTLNYRKKEFSRINEDNAKNLQEVLDNNTLKSKLGVDIESLEED-NTQIKVNFTDNTSESF----DRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 2ZBW Chain:A ((7-293)) | ------DVLIVGAGPTGLFAGFYVGMRGLS-FRFVDPLPEPGGQLTALYP---------EKYIYDVAG---FPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF-RAHEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALE-KNKIKV--DTTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115969 for 2185 contacts (-53.1/contact) +
2D Compatibility (PS) -29528 + (NN) -4544 + (LL) 1340
1D Compatibility (HY) -18800 + (ID) 3800
Total energy: -171301.0 ( -78.40 by residue)
QMean score : 0.413
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