Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPHINAKIGDFYPQCLLCGDPLRVSYIAKNFLQDAKEITNVRNMLGFSGKYKGKGISLMGHGMGIASCTIYVTELIKTYQVKELLRIGTCGAISPKVGLKDIVMATGASTDSKTNRVRFLNHDLSATPDFELSLRAYQTAKRLGIDLKIGNVFSSDFFYSFETHAFGLMAQYNHLAIEMEAAGLYATAMELNAKALCLCSVSDHLITKEALSPKERIESFDNMITLALEMMS
1PR0 Chain:A ((3-231))
-TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVL
General information:
TITO was launched using:
RESULT:
Template:
1PR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187504 for 1968 contacts (-95.3/contact) +
2D Compatibility (PS) -23775 + (NN) -3726 + (LL) 208
1D Compatibility (HY) -24000 + (ID) 6200
Total energy: -244997.0 ( -124.49 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_1PR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PR0-query.scw
PDB file :
Tito_Scwrl_1PR0.pdb
: