Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFGVFGNPIKHSKSPLIHNACFLTFQKELGFLGHYHPILLPLESRIKNEFLHLGLSGANVTLPFKERAFQICDKIKGIALECASVNTLVLENDELVGYNTDALGFYLSLKHQNYQNDQNALILGAGGSAKALACGLQKQGLKVSVLNRSARGLDFFQRLGCDCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKESKLAYDLAYGFLTPFLSLAKELKIPFQDGKDMLIYQASLSFEKFSDSQIPYSKAFEVMRSVF
4FSH Chain:A ((1-263))
MKLKSFGVFGNPIKHSKSPLIHNACFLTFQKKLGFLGHYRPILLPLESHIKNEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECASINTLVLENDELVGYNTDALGFYLSLKHQNYQN---ALILGSGGSAKALACGLKKQGLKVSVLNRSPRGLDFFQRLGCDCFMEPPKSAFDLIINATSASLN---PLNKEVLKGYFKEAKLAYDLAYGFLTPFLALAKELKIPFQDGKDMLIYQASLSFEKFSASQIPYSKAFEVMRSVF
General information:
TITO was launched using:
RESULT:
Template:
4FSH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -190358 for 2243 contacts (-84.9/contact) +
2D Compatibility (PS) -27328 + (NN) -8095 + (LL) 164
1D Compatibility (HY) -40800 + (ID) 12400
Total energy: -278817.0 ( -124.31 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_4FSH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FSH-query.scw
PDB file :
Tito_Scwrl_4FSH.pdb
: