Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLEGLSLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKER-DYLEEKIITLENKFKDMGHYAASDEVNEKQVLKMYQEGYSVDSISKEFKVSKGEVEFILNMAGLKW |
1L6N Chain:A ((54-132)) | ------------------------------------------------------SEGCRQILGQLQ-PSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEE----QNKSKKKAQQAAADTGNNSQVSQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18141 for 437 contacts (41.5/contact) +
2D Compatibility (PS) -8387 + (NN) -2173 + (LL) 5832
1D Compatibility (HY) -800 + (ID) 1450
Total energy: 11163.0 ( 25.54 by residue)
QMean score : 0.193
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