Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPIKTYDIKEEELAKTAYATIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGP-------EHRIKCEVAHNPNKHQRGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAESLSVLDKIKQGDIIESVVFSPSL
2B71 Chain:A ((40-169))
------------------YITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKELKHT----GAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARV--SKNMTCIENIASVQTTATNKPIFDL
General information:
TITO was launched using:
RESULT:
Template:
2B71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70909 for 910 contacts (-77.9/contact) +
2D Compatibility (PS) -12873 + (NN) -2899 + (LL) 1540
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -99491.0 ( -109.33 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2B71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B71-query.scw
PDB file :
Tito_Scwrl_2B71.pdb
: