Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNPIEIKAKTLEEALIQASIALNCPIINLQYEVIQMPSKGFLNIGKKEAIILVGVKESVKEVKEESVKEIHQNAEEKQSLGIKTPQEEIITPKPPKKTPKEESHNGDKLHEIKQELKDLFSHLPYKINKVEVSLYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLLFNWIHPAYGYSIHLEISTFLQNQEKVMEAQLQSTIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVINDFNNE
2PT7 Chain:G ((115-259))
------------------------------------------------------------------------------------------------------------KLHEIKQELKDLFSHLPYKINKVEVSLYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLLFNWIHPTYGYSIRLEISTFLQNQEKVMDTQLQSVIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVIN-----
General information:
TITO was launched using:
RESULT:
Template:
2PT7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92811 for 1008 contacts (-92.1/contact) +
2D Compatibility (PS) -15886 + (NN) -9163 + (LL) 7856
1D Compatibility (HY) -23600 + (ID) 7000
Total energy: -140604.0 ( -139.49 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_2PT7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PT7-query.scw
PDB file :
Tito_Scwrl_2PT7.pdb
: