Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFLGRAEDLITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASGKRSISGTDTEKISQLVDKELIASKMLARYVGKDRVFVLVGLDKQIVDKVREELGMVKK
3N8D Chain:A ((39-95))----------------------------------------------------------------------------DIIYITNDGDWRKQNNITAEIKSTDELHLE----LEISQLLKESSSGQPYDAVFPLLNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHR


General information:
TITO was launched using:
RESULT:

Template: 3N8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) 11447 for 242 contacts (47.3/contact) +
2D Compatibility (PS) -5273 + (NN) 1263 + (LL) 5072
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 8909.0 ( 36.81 by residue)
QMean score : 0.175

(partial model without unconserved sides chains):
PDB file : Tito_3N8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N8D-query.scw
PDB file : Tito_Scwrl_3N8D.pdb: