Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEVINGKNYAE--KTAHQAVVVNVGASWCPDCRKIEPIMENLAKTYKGKVEFFKVSFDESQDLKESLGIRKIPTLIFYKNAKEVGERLVEPSSQKPIEDALKALL
3ZIV Chain:A ((6-106))
----INDENFDEVIKKSDKVVVVDFWAEWCGPCRMIAPIIEELAEEYAGKVVFGKVNVDENPEIAAKYGIMSIPTLLFFKNGKVV-DQLVGARPKEALKERIKKYL
General information:
TITO was launched using:
RESULT:
Template:
3ZIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59084 for 671 contacts (-88.1/contact) +
2D Compatibility (PS) -10740 + (NN) -3406 + (LL) 508
1D Compatibility (HY) -12800 + (ID) 2150
Total energy: -87672.0 ( -130.66 by residue)
QMean score : 0.765
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIV-query.scw
PDB file :
Tito_Scwrl_3ZIV.pdb
: