Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLSALLAFSCAHALSDM---DLIKKAKESQLEPMPMGKALKEYQIKKTRDVGIGAKNSEIMTSAQVELGKMLYFDPRISTSYLVSCNTCHNLGLGGVDLIPSAIGSQWKKNPHLLSSPTVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKVVVEKINSIPGYVKLFRKAY-GSKVKIDFKLIADSIAMFEATLITP-SRYDDFLRGNPKALSKAEKEGLDLFISKGCVACHNGINLGGTMQ-PFGVV-KPYKFANVGDFKGDKNG----LVKVPTLRNITETMPYFHNGQFWDVKDAIKEMGSIQLGIEISDAEAKKIETFFEALKGKKPKIIYPELPVMTDKTPKPSF |
| 3HQ7 Chain:A ((20-343)) | ----------------------FAADELQQRAQGLFKPVPA----KAPTLK-------GNPASPV----KVELGKMLYFDPRLSASHLISCNTCHNVGLGGGDLQATSTGHKWQQGP--INAPTVLNSVFNTA-------------AKGPVQASVEMNNTPDQVVKTLNSIPDYVALFKKAFPGEKDPVTFDNMAKAIEVFEATLITPDSPFDQYLKGKKKALDGKQTAGLKLFLDKGCVACHGGLNLGGTGYFPFGVVEKP-----KGRFAVTNTAKDEYVFRAPSLRNVAITYPYFHSGVVWSLKEAVAVMGSAQFGIKLSDDESEAIAAFLGSLTGKQPKVVYPIMPASTDATPRPRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58253 for 2318 contacts (-25.1/contact) +
2D Compatibility (PS) -31498 + (NN) -15140 + (LL) 4720
1D Compatibility (HY) -27200 + (ID) 7450
Total energy: -134821.0 ( -58.16 by residue)
QMean score : 0.320
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