Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESLIGLTVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFIFTLIKHAGNIFNLLTGKEKKVL |
1GV0 Chain:A ((1-37)) | -------------------------------------MKITVIGAGNVGATTAFRLAE-------KQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVVITAGLPRKPGMTLSMNAGIVREVTGRIMEHSKNPIIVVVSNPLDIMTHVAWQKSGLPKERVIGMAGVLDSARFRSFIAMELGVSMQDVTACVLGGHGDAMVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8153 for 204 contacts (-40.0/contact) +
2D Compatibility (PS) -3811 + (NN) 710 + (LL) 2776
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -12878.0 ( -63.13 by residue)
QMean score : 0.174
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